Welcome to AIB001's Homepage¶
A.I.B. (Zhaoqi Shi)
Double major in Biological Science and Physics; Serving as RA in Institute of Quantitative Biology, Zhejiang University (ZJU). I'm instructed by Prof. Rui Shi and Prof. Ruhong Zhou in ZJU. And I'm a Ph.D. candidate in Theoretical Chemistry Institute, University of Wisconsin-Madison.
Researcher in molecular biophysics, focusing on molecular dynamic simulation, protein structure-function relationships and biomolecular condensates.
Research Interests¶
Small Molecules
Investigating small molecule interactions with proteins and their applications in drug development.
Learn more →Condensates
Studying biomolecular condensate formation, regulation, and function in cellular environments.
Learn more →Other Research
Exploring computational biology, biophysics, and developing new methodologies.
Learn more →About This Site¶
This website serves as a repository for my research projects, learning resources, and personal interests. Feel free to explore the different sections:
- Academic Research: Research projects, publications, and ongoing work
- Learning: Notes and resources from various fields including biology, physics, and more
- Life: Personal blog, travel experiences, and reading reflections
If you're interested in collaborating or have questions about my work, please feel free to contact me.
CV¶
Basic Information
Education
Skills
Programming Languages
C, C++, Python, R, Shell, Assembler (x86)
Molecular Dynamics Software
NAMD, GROMACS, OpenMM, AmberTool, CHARMM-GUI, Smina, Autodock Vina, MDAnalysis, Rdkit
Molecular Visualization
Pymol, VMD, ChimeraX, LigPlot+
Biological Techniques
Surface Plasmon Resonance (SPR), Transmission Electron Microscopy (TEM), IC50 Determination, Western Blotting, PCR
Research & Design
Biorender, LaTeX, PowerPoint, Photoshop, Adobe Illustrator, Website Development